StaffGiovanna Frugis


Informations



E-mail
frugis@ibba.cnr.it

Phone
+39 0690672310

Office
Roma

Research area
BIOTEC, BIOGEN, PAINT, BIOCEL


ORCID: 0000-0002-6405-7386
Google Scholar: Profile
Research Gate: Giovanna Frugis
Scopus Author ID: 6602972047
WoS Researcher ID: C-4892-2015
Linkedin: Giovanna Frugis

Frugis Giovanna

Senior Researcher

Education

1992-1996: PhD level formation in Plant Molecular Biology at National Research Council (CNR-IBEV)

1991: Degree in Biological Sciences at University “La Sapienza” of Rome

Professional experience

2007- Present: Permanent position as Senior CNR Researcher (II Livello). Research activity in Plant Molecular Biology,Plant Development and Functional Genomics

2016: Short Term Fellowship CNR at Max Planck Institute (MPI) for Developmental Biology of Tuebingen (Germany) in Laboratory of Prof. Detlef Weigel. Research activity: Screening of 1135 genomes of Arabidopsis thaliana natural accessions to identify adaptive mutations in flowering  time genes

2016: Short Term Fellowship CNR at Laboratoire de Biologie Cellulaire dell’Istitut National de la Recherce Agronomique (INRA), Versailles, France with Prof. Jan Traas. Research activity: localization of mRNA in plant tissues by in situ hybridization techniques

2001-2006: Permanent position as CNR Researcher (III Livello) before  at Istituto di Biologia Agroambientale e Forestale (IBAF) of the CNR (Dec 2001-June 2003), and than at Istituto di Biologia e Biotecnologia Agraria (IBBA) of the CNR (July 2003- 2006). Research activity in Plant Molecular Biology, Plant Development and Functional Genomics

2001: Post-doctoral position at CNR Istituto di Biologia ed Ecofisiologia Vegetale (IBEV). Research activity in Plant Molecular Biology

1998-2001: Post-doctoral position at Laboratory of Plant Molecular Biology, Rockefeller University. Research activity in Plant Molecular Biology and Arabidopsis Genetics

1996-1998: Post-doctoral position at CNR Istituto di Biologia ed Ecofisiologia Vegetale (IBEV). Research activity in Plant Molecular Biology

Research interests

  • Identification of the major genetic determinants of plant development and organogenesis in model (e.g. Arabidopsis thaliana, Medicago truncatula) and cultivated species (e.g. lettuce, chicory and legumes) for crop genetic improvement  – Translational biology from models to plants of interest to sustainable agriculture – Systems biology and “omics” technologies for the identification of “hub” genes, functional allelic variants and trait-specific genes for precision breeding (leaf development; shelf life and senescence; regulatory pathways of photosynthesis; flowering time; symbiotic nodule organogenesis and signaling; adaptative and domestication traits).

Projects in progress

Projects completed

PARDOM - Parallel Domestications: the Phaseolus replicated experiment to understand genome evolution and adaptation
Start date: 29/04/2020   End date: 28/04/2023

MIUR

Milano, Roma
Francesca Sparvoli

Project duration:
29/04/2020 - 28/04/2023
Financing body:
MIUR
Project research leader:
Francesca Sparvoli
Headquarters:
Milano, Roma

PARDOM - Parallel Domestications: the Phaseolus replicated experiment to understand genome evolution and adaptation


As similar sets of traits evolved over a wide range of species during domestication (e.g. seed size) the study of wild and domestic forms is a key model to understand convergent phenotypic evolution. Phaseolus is a unique example of multiple parallel domestications in five closely related species. Of these, P. vulgaris (PV), and P. lunatus (PL), were each domesticated independently in Mesoamerica and the Andes, defining at least four independent domestication events. To understand the genomic architecture of domestication, we will set-up a ‘domestication experiment’ with full factorial design for three factors: species, areas and wild/ domestic status. Using cutting-edge population genomics approaches (including machine learning methods) we will compare PV and PL, using high-quality whole-genome sequencing, pan-genome assembly, RNA sequencing, metabolomics, and phenotyping. TILLING-by-sequencing and genome editing will be used for functional validation of candidate domestication genes. Overall, this Project has both fundamental and applied implications: it addresses relevant, but poorly answered, questions related to genomic changes during selection and adaptation, and it will provide crucial knowledge for development of improved crop varieties to meet societal challenges.
BIO-MEMORY
Start date: 15/10/2021   End date: 15/02/2024

CNR

Milano, Lodi, Pisa, Roma
Flavia Pizzi, Aldo Ceriotti

Project duration:
15/10/2021 - 15/02/2024
Financing body:
CNR
Project research leader:
Flavia Pizzi, Aldo Ceriotti
Headquarters:
Milano, Lodi, Pisa, Roma

BIO-MEMORY


The project is organized in 3 main activities:

1) Implementation and updating of the BioGenRes network of biobanks, with a focus on nationally/internationally recognized collections of animal, plant or microorganism species samples (animal and plant germplasm banks, microbial strain libraries of pathogenic/toxigenic organisms, nematodes, soil and water microflora and microorganisms used in agro-industry and food (e.g. microbial starters for fermentations)).

2) Replication (rejuvenation) and expansion of material stored in collections. For plant and microbial collections: multiplication of accessions for which a small amount of material is available and rejuvenation of accessions whose seed viability data are below the expected standards (> 85%). For animal collections of zootechnical interest: collection and freezing of genetic material of local breeds to complete sampling carried out in previous projects or expansion of the number of species and breeds stored in cryobanks.

3) Biochemical, molecular, metabolic, functional and phenotypic characterization of the material conserved in the biobanks of the BioGenRes network, also in order to carry out association studies and to identify markers associated with traits linked to production and/or adaptation to biotic and abiotic stress factors.

MITICAL - Improvement of the cultivation and production of industrial hemp in Lombardy through innovative cultivation techniques
Start date: 01/07/2020   End date: 30/12/2023

Regione Lombardia

Milano, Lodi, Roma
Monica Mattana

Project duration:
01/07/2020 - 30/12/2023
Financing body:
Regione Lombardia
Project research leader:
Monica Mattana
Headquarters:
Milano, Lodi, Roma

MITICAL - Improvement of the cultivation and production of industrial hemp in Lombardy through innovative cultivation techniques


The MITICAL project aims to deepen knowlege on industrial hemp culture, focusing on the final use of two main products: seeds and flowers. The project will be based on the following activities:

  • analysis of 4 hemp varieties, two monoecius and two dioecious, cultivated in two different pedoclimaticzones in Lombardy region,
  • evaluation of the agronomic performances after different growing condition: control, biostimulant treatment, elicitor treatment,
  • seeds:evaluation of nutritional quality by measuring protein and oil content, fatty acid profile and antinutritional compound content,
  • flowers: evaluation of secondary metabolites content (CBD, THC,) and other polyphenols,
  • study of transcriptome: correlation analysis between gene expression and phenotype/metabolite, identification of allelic polymorphism (SNP) and coexpression network,
  • metagenomic analysis of soil: characterization of fungi, bacteria, metazoa, before and after hemp cultivation.

The project will be hold with the collaboration of agrofarms belonging to the two lombard agriculture districts and the results obtained on seeds will be viable for feed and food industries whereas those on flowers for pharma and cosmetic sector.

SMART-BREED - Innovative molecular technologies for the adaptation of horticultural species to climate change through precision breeding
Start date: 22/07/2021   End date: 22/01/2024

Regione Lazio - contribution of € 150.000

Roma
Giovanna Frugis

Project duration:
22/07/2021 - 22/01/2024
Financing body:
Regione Lazio - contribution of € 150.000
Project research leader:
Giovanna Frugis
Headquarters:
Roma

SMART-BREED - Innovative molecular technologies for the adaptation of horticultural species to climate change through precision breeding


The project aims to develop innovative molecular technologies to study the effects of genetic variability and use this information to accelerate the breeding of new resilient varieties that maintain their productive and typical characteristics in variable and extreme environmental conditions. Since genes encoding transcription factors (TFs) are the main targets on which the processes of adaptation of the genotype to the environment naturally act, the project will focus, as a “proof of concept”, on transcription factors with a proven role in the response of shade avoidance and in the flowering induction response.

Aims. To innovate the traditional agricultural sector through the use of advanced technologies that allow the preservation and valorization of the agricultural biodiversity.

Results. Development of innovative molecular tools for the genetic improvement and adaptation of vegetable species belonging to the Brassicaceae, Asteraceae and Solanaceae families through precision breeding and biotechnology.

Partnership: CNR, Istituto di Biologia e Patologia Molecolari (CNR-IBPM);  CREA, Centro di Ricerca Genomica e Bioinformatica (CREA-GB), Unit of Rome.

NUTR-AGE: Nutrition, Diet and Active Aging
Start date: 01/01/2019   End date: 31/12/2021

MUR

Milano, Pisa, Roma   Website

Laura Pucci

Project duration:
01/01/2019 - 31/12/2021
Financing body:
MUR
Project research leader:
Laura Pucci
Headquarters:
Milano, Pisa, Roma
Project website:
Website

NUTR-AGE: Nutrition, Diet and Active Aging


The aim of the project is to evaluate the impact of new functional foods and bioactive compounds on human health, with particular interest in the prevention of the main neurodegenerative and metabolic diseases linked to population aging. Thanks to the integrated approach of different scientific skills it was possible:

1. to select the bioactive compounds present in the different food matrices (including the by-products of the agri-food industry);

2. to identify the richer fractions in the greatest interest products to obtain bio-fortified, functional and pre-pro-post-biotic foods;

3. to study their protective effects through in vitro studies and on animal models;

4. to preserve the biological activities during the processing phases and cooking;

5. to verify their bioavailability and regulation role on the intestinal microbiota.

Istituto

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